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Linux Mint is one of the most user-friendly Linux distributions available today. It’s stable, intuitive, and built to make the transition from Windows as smooth as possible. One of the first things every user notices in Linux Mint is the way software is installed and updated. Unlike Windows, where you mostly download installers from websites, Mint offers centralized software management through package managers.
But here comes a common question: should you use APT or Flatpak in Linux Mint? The answer depends on your needs. In this guide, we’ll explain the differences in detail, highlight real-world examples, and help you decide which tool is best for your workflow. By the end, you’ll have a clear understanding of when to stick with APT and when to embrace Flatpak.
APT (Advanced Package Tool) is the traditional package manager used by Debian, Ubuntu, and Linux Mint. It pulls software directly from official repositories that are tested and maintained by the Linux Mint and Ubuntu teams. When you install something using APT, you know it has been reviewed for stability and compatibility with your Mint version.
APT has been around for decades, and it’s extremely reliable. Most Linux guides, tutorials, and forums assume you’re using APT when they tell you to “run this command to install X.”
Flatpak is a newer approach to software distribution that aims to make apps universal across different Linux distributions. Instead of relying on the Mint repositories, Flatpak apps usually come from Flathub, a large community-driven app store. Flatpak apps are sandboxed, meaning they run in isolation from your system, which adds an extra layer of security.
Flatpak is especially useful for modern desktop apps that move fast, such as Spotify, Zoom, or Visual Studio Code, where the Flatpak version is updated far more frequently than the APT version.
While both APT and Flatpak let you install and manage software, they work differently under the hood. Here’s a comparison table that highlights the main differences:
Feature | APT | Flatpak |
---|---|---|
App Versions | Stable, but often older | Latest versions available |
System Integration | Full integration with Mint | Isolated, sandboxed |
Security | Relies on system-level updates | Enhanced with sandboxing |
Storage Usage | Minimal footprint | Heavier due to runtimes |
Best For | Core apps and stability | Latest apps and new features |
If you install GIMP via APT, you might get version 2.10.x, which is stable but not the absolute latest. If you install via Flatpak, you’ll likely get the newest release, possibly 2.99.x (development build).
# APT version
sudo apt install gimp
# Flatpak version
flatpak install flathub org.gimp.GIMP
Zoom is not in the APT repositories by default. You’d need to manually download a .deb file. But with Flatpak, it’s just:
flatpak install flathub us.zoom.Zoom
You can have an app installed via both APT and Flatpak at the same time. This is handy if you want to compare performance or test features. For instance, run the APT-installed GIMP for stability, but also keep the Flatpak version for testing new tools.
Sometimes you might forget which package manager you used. Here’s how to check:
/usr/bin/
and managed via dpkg
/var/lib/flatpak/
or ~/.local/share/flatpak/
You can also run:
which gimp
flatpak list | grep gimp
Flatpak apps can sometimes feel a little slower to start because of sandboxing and additional runtimes. They also use more disk space, since each app may include its own libraries. APT apps, on the other hand, share system libraries, which keeps them smaller and more efficient.
If you’re using an older laptop with limited storage or RAM, APT is usually the better choice. If you’re on a modern system and prefer having the newest features, Flatpak is worth it.
One major advantage of Flatpak is sandboxing. Apps have restricted access to your system, which reduces the chance of malware or accidental system damage. However, keep in mind that Flatpak permissions can be customized. Tools like Flatseal
let you fine-tune app permissions (such as access to files, USB devices, or the internet).
APT apps are not sandboxed, but they are thoroughly tested and vetted by Mint/Ubuntu developers. Security updates are pushed regularly through the Mint Update Manager.
One thing users often notice is that Flatpak apps take up more disk space. For example:
This is because Flatpak apps bundle extra runtimes to ensure compatibility across all Linux distros. While this makes Flatpak universal, it does come with a storage cost.
Linux Mint supports both systems side by side, so there’s no need to choose one permanently. Some tips:
Flatpak and APT are not competitors but complementary tools in Linux Mint. APT gives you rock-solid stability and integration, while Flatpak provides flexibility and cutting-edge software. By understanding when to use each, you can make the most of your Mint experience.
For everyday users, the best approach is simple: use APT for your core apps and Flatpak for your modern apps. This way, you get the perfect balance of stability and freshness without sacrificing performance.
Linux Mint’s decision to support both package managers is one of the reasons it’s so popular among Linux users. You’re not locked into one ecosystem—you get the freedom of choice. So the next time you install an app, ask yourself: do I want stability, or do I want the latest features? The answer will guide you to APT or Flatpak.
Whichever you choose, you’ll be building a Linux Mint system that’s tailored to your needs, reliable for work, and flexible for fun.